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Common:

  • Getting Started
  • Common database operations
  • How to find what you need
  • Common Pipeline Conventions
  • Mass data ingestion
  • Building your own pipeline
  • Troubleshooting

Electrophysiology:

  • Ephys: Overview
  • Ephys: Terminology
  • Ephys: Fetching data
  • Ephys Naming Conventions
  • Ephys Folder Structure
  • How is data in the Ephys pipeline processed?
  • Ephys: Web GUI
  • Ephys: following units across multiple sessions
  • Ephys: Mass Ingestion

Imaging:

  • Imaging: Overview
  • Imaging: Terminology
  • Imaging: The basics
  • Table overview in the Imaging pipeline
  • Imaging: Naming and Folder logic
  • Imaging: Web GUI
  • Imaging: DLC
  • Imaging: Recording Viewer
  • Imaging: Synchronisation
  • Imaging: Field-of-view unwarping
  • Imaging: Helper notebooks

Developer Documentation:

  • How to contribute
  • Components of the pipeline
  • Imaging: Installation
  • Running your own workers
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© Copyright 2020, Simon Ball. Revision d8506736.

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