Getting Started

WARNING! This is a frozen branch of the documentation representating the final state of the ``dj-moser-imaging`` branch of the Imaging Pipeline in January 2022.

This page provides details to help you get started with Datajoint at the Moser group.

The Datajoint interface is available in both Python and Matlab. Screening analysis is performed by both Python (Opexebo) and Matlab (Behavioural Neurology Toolbox). Data may be fetched in either Python or Matlab for more advanced analysis, depending on user preferences. Additional tools (for example: data export for publication) are provided in Python.

If you are new to programming, it is recommended to begin with Python. More experienced coders should choose whichever language they feel most comfortable in.

Getting Started:

• Why should you use these pipelines?
  • What are they?
  • Why use them?
  • The data life cycle
• Getting Started with Datajoint (Python)
  • Programming Language
  • Connecting to the pipeline database